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BaseInfo

ncRNA ID ath-miRf10816-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UACUCGACCACAUGGUCGAGU - NA
Stem-loop(if miRNA)          ACA           UAA       UG
UACUCGACC   UGGUCGAGUAU   CAUCGAG  G
|||||||||   |||||||||||   |||||||  U
GUGAGCUGG   ACCAGCUCAUG   GUGGUUC  U
         GAC           ---       UG
Stem-loop sequence UACUCGACCACAUGGUCGAGUAUUAACAUCGAGUGGUUGUCUUGGUGGUACUCGACCACAGGGUCGAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183194.1
ncRNA:21   UGAGCUGGUACACCAGCUCAU   1
  |||||||||||*||||||||=
targets:518   ACUCGACCAUGAGGUCGAGUG   538

2.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
EF183311.1
ncRNA:21   UGAGCUGGUACACCAGCUCAU   1
  |||||||||||||||*||||=
targets:188   ACUCGACCAUGUGGUAGAGUG   208

2.5 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget
AY231407.1
ncRNA:21   UGAGCUGGUACACCAGCUCAU   1
  ||||*||||*|||||||||||
targets:644   ACUCAACCACGUGGUCGAGUA   664

2.5 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget
EF183194.1
ncRNA:21   UGAGCUGGUACACC-AGCUCAU   1
  ||||||||||||||-|||||||
targets:721   ACUCGACCAUGUGGGUCGAGUA   742

3.0 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget