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BaseInfo

ncRNA ID novel_cmo_miR22
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr15:9646817-9646933 [-]
Reference genome Cmoschata_v1
Source SRR1632266
Length 24
Mature sequence(if miRNA) 1 - AGAGGACAGUAUCUACUAGCGGUG - 24
Stem-loop(if miRNA) --  A      A                    -     CA       AAAACGCGUCUAAAAAA  U
  CC CUAGUA AUAUUGUUCUUUUUGGGCUU CCCUU  AAGUUUU                 CC C
  || |||||| |||||||||||||||||||| |||||  |||||||                 ||
  GG GAUCAU UAUGACAGGAGAAACCCGAA GGGAA  UUCGAAG                 GG A
GU  C      C                    A     AG       ----------------G  A
Stem-loop sequence CCACUAGUAAAUAUUGUUCUUUUUGGGCUUCCCUUCAAAGUUUUAAAACGCGUCUAAAAAACCUCAAGGGGAAGCUUGAAAGGGAAAGCCCAAAGAGGACAGUAUCUACUAGCGGUG