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BaseInfo

ncRNA ID	ahy-miR3509-5p
Species	Arachis hypogaea
Class	miRNA
Genome position	NA
Reference genome	NA
Source	miRBase
Length	22
Mature sequence(if miRNA)	NA - AUACUUGAGAGCCGUUAGAUGA - NA
Stem-loop(if miRNA)	----------------------------------------UC          U        A  C       C          UUU    GAUU                                           GACUUCACGU GAAGUUGA UA UUGAGAG CGUUAGAUGA   GAUU    U                                           |||||||||| |||||||| || ||||||| ||||||||||   ||||                                           CUGAAGUGCA CUUCAACU AU GACUCUC GCAAUCUACU   UUAA    G GAUUAAGAUAAAAACAUAAUUCCACUUUUGAGUCCACUUCAA          -        -  A       A          --U    AUCA
Stem-loop sequence	UCGACUUCACGUUGAAGUUGAAUACUUGAGAGCCGUUAGAUGAUUUGAUUGAUUUGACUAAAUUUUCAUCUAACGACUCUCAGAUAUCAACUUCACGUGAAGUCAACUUCACCUGAGUUUUCACCUUAAUACAAAAAUAGAAUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01053414.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   |||||||||||||||||||||| targets:36   UCAUCUAACGGCUCUCAAGUAU   57 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene53453 mRNA sequence	NA	coding protein	psRNATarget
JR585639.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   |||||||||||||||||||||| targets:49   UCAUCUAACGGCUCUCAAGUAU   70 Target Full Sequence	0.0	TSA: Arachis hypogaea Ahy.Unigene52188 mRNA sequence	NA	coding protein	psRNATarget
EZ757695.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   ||||=||||||||||||||||| targets:706   UCAUUUAACGGCUCUCAAGUAU   727 Target Full Sequence	1.0	TSA: Arachis hypogaea CL11722Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01053414.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   ||||||||||||||||||*||| targets:2   UCAUCUAACGGCUCUCAAAUAU   23 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene53453 mRNA sequence	NA	coding protein	psRNATarget
JR585639.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   ||||||||||||||||||*||| targets:15   UCAUCUAACGGCUCUCAAAUAU   36 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene52188 mRNA sequence	NA	coding protein	psRNATarget
GAER01054132.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   |||||||||||||||||=|||| targets:166   UCAUCUAACGGCUCUCAGGUAU   187 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene54173 mRNA sequence	NA	coding protein	psRNATarget
EZ723307.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   |=||||||||||||||||*||| targets:183   UUAUCUAACGGCUCUCAAUUAU   204 Target Full Sequence	1.5	TSA: Arachis hypogaea CL1Contig2323.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01019524.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   ||=|||||||||||||||*||| targets:210   UCGUCUAACGGCUCUCAAUUAU   231 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene19533 mRNA sequence	NA	coding protein	psRNATarget
JR559052.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   |=||||||=||||||||=|||| targets:43   UUAUCUAAUGGCUCUCAGGUAU   64 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene18963 mRNA sequence	NA	coding protein	psRNATarget
JR581646.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   ||||=|||||||||||||*||| targets:112   UCAUUUAACGGCUCUCAAUUAU   133 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene47526 mRNA sequence	NA	coding protein	psRNATarget
GAER01053760.1	ncRNA:22   AGUAGAUUGCCGAGAGUUCAUA   1   |=||=|||||||||||||*||| targets:99   UUAUUUAACGGCUCUCAAUUAU   120 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene53800 mRNA sequence	NA	coding protein	psRNATarget

Reference

1	PMID:20047695 "Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"; Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ; BMC Plant Biol. 10:3(2010).