ncRNA ID | novel_cmo_miR15 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr14:3302644-3302767 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632266 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAAUAGGGGGAGUUAGGGAUC - 21 |
Stem-loop(if miRNA) |
--A                   CC     C    A      U UU  A  G   GC     UCC    AAUAGGGGGAGUUAGGGAU  UAGAG GGGA UAUUUU G  GU GU UGG  UCUCU   A    |||||||||||||||||||  ||||| |||| |||||| |  || || |||  |||||    UUAUCCCUCUCGAUCCCUA  AUCUU CCCU AUAAAA C  UA CA GUC  AGAGG   A UAC                   AA     -    A      - UC  A  G   --     CUG |
Stem-loop sequence | AAAUAGGGGGAGUUAGGGAUCCUAGAGCGGGAAUAUUUUUGUUGUAGUGUGGGCUCUCUUCCAAGUCGGAGACUGGACAAUCUCAAAAUAAUCCCUUCUAAAAUCCCUAGCUCUCCCUAUUCAU |