ncRNA ID | novel_cmo_miR9 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr14:6427631-6427818 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632266;SRR1632267 |
Length | 19 |
Mature sequence(if miRNA) | 170 - GGGGACGUAGCUCAGAUGG - 188 |
Stem-loop(if miRNA) |
--           --AG      UUCUUGA  C              U   UG        A     A           A    G C     ACA   AUCUGGGCUAU    CCACAA       AU ACAAAACCCUAAAU UUU  UCAUCAAU AUAGU AAAAUGAAGAA UAUC C ACUCA   U   |||||||||||    ||||||       || |||||||||||||| |||  |||||||| ||||| ||||||||||| |||| | |||||   UAGACUCGAUG    GGUGUU       UA UGUUUUGGGAUUUG AGA  AGUAGUUA UAUCA UUUUGCUUUUU AUAG G UGAGU   G GG           CAGG      CAAAAUG  A              C   GU        A     C           G    A A     ACU |
Stem-loop sequence | AUCUGGGCUAUAGCCACAAUUCUUGAAUCACAAAACCCUAAAUUUUUUGUCAUCAAUAAUAGUAAAAAUGAAGAAAUAUCGCCACUCAACAUGUCAUGAGUAGAGAUAGUUUUUCGUUUUCACUAUAAUUGAUGAUGAGACGUUUAGGGUUUUGUAAUGUAAAACUUGUGGGGACGUAGCUCAGAUGG |