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BaseInfo

ncRNA ID novel_cmo_miR9
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr14:6427631-6427818 [+]
Reference genome Cmoschata_v1
Source SRR1632266;SRR1632267
Length 19
Mature sequence(if miRNA) 170 - GGGGACGUAGCUCAGAUGG - 188
Stem-loop(if miRNA) --           --AG      UUCUUGA  C              U   UG        A     A           A    G C     ACA
  AUCUGGGCUAU    CCACAA       AU ACAAAACCCUAAAU UUU  UCAUCAAU AUAGU AAAAUGAAGAA UAUC C ACUCA   U
  |||||||||||    ||||||       || |||||||||||||| |||  |||||||| ||||| ||||||||||| |||| | |||||
  UAGACUCGAUG    GGUGUU       UA UGUUUUGGGAUUUG AGA  AGUAGUUA UAUCA UUUUGCUUUUU AUAG G UGAGU   G
GG           CAGG      CAAAAUG  A              C   GU        A     C           G    A A     ACU
Stem-loop sequence AUCUGGGCUAUAGCCACAAUUCUUGAAUCACAAAACCCUAAAUUUUUUGUCAUCAAUAAUAGUAAAAAUGAAGAAAUAUCGCCACUCAACAUGUCAUGAGUAGAGAUAGUUUUUCGUUUUCACUAUAAUUGAUGAUGAGACGUUUAGGGUUUUGUAAUGUAAAACUUGUGGGGACGUAGCUCAGAUGG