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BaseInfo

ncRNA ID	ath-miRf10814-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CGACCUCGGGGUCGAGUGGU - NA
Stem-loop(if miRNA)	G         U G           -U  A  G A GAGG CACUCGACC C GGGUCGAGUGG  GA GU A G |||| ||||||||| | |||||||||||  || || | U CUCU GUGAGCUGG G UCCAGCUCAUC  CU UA U G     G         U G           UC  G  G G
Stem-loop sequence	GAGGGCACUCGACCUCGGGGUCGAGUGGUGAAGUGAAGUGGUGAUGUCCUCUACUCGACCUGGUGGUCGAGUGGUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY227642.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   |||||||||||||||||||| targets:853   ACCACUCGACCCCGAGGUCG   872 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   |=|||||||||||||||||| targets:1616   AUCACUCGACCCCGAGGUCG   1635 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   |*|||||||||||||||||| targets:1058   AGCACUCGACCCCGAGGUCG   1077 Target Full Sequence	1.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   ||||||||||||*||||||| targets:762   ACCACUCGACCCAGAGGUCG   781 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   |||||||||||*|||||||| targets:1525   ACCACUCGACCACGAGGUCG   1544 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   ||||||||||||||*||||| targets:488   ACCACUCGACCCCGUGGUCG   507 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   |||||||||||||*|||||| targets:1103   ACCACUCGACCCCCAGGUCG   1122 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   |||||||||||*|||||||| targets:1149   ACCACUCGACCACGAGGUCG   1168 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   ||||||||||||||*||||| targets:1208   ACCACUCGACCCCGUGGUCG   1227 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183005.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   =*|||||||||=|||||||| targets:1863   GGCACUCGACCUCGAGGUCG   1882 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:20   UGGUGAGCUGGGGCUCCAGC   1   *|=||||||||||*|||||| targets:186   UCUACUCGACCCCCAGGUCG   205 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget