ncRNA ID | novel_cmo_miR6 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr13:8727012-8727193 [-] |
Reference genome | Cmoschata_v1 |
Source | SRR1632266 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUGGAUUGAAGGGAGCUCUA - 21 |
Stem-loop(if miRNA) |
--         GA       UA       GU  ----U        C   -  G     C    G UC  U   C   U   -   AUCUCAUCA   GAGCUCCUU  AGUCCAA  GAGGGUU  GC     UGGUUGAU GAG CU CUGAG UAUG A  CC CAG CCC AUC GCU         A   |||||||||  |||||||  |||||||  ||     |||||||| ||| || ||||| |||| |  || ||| ||| ||| |||   CUCGAGGGA  UUAGGUU  UUCCUAA  UG     GUCAACUA CUU GA GACUC AUAC U  GG GUC GGG UAG CGA         U AU         AG       UG       GU  UUUUU        -   A  G     U    G UC  U   C   -   U   AAUCUAUAC |
Stem-loop sequence | GAGCUCCUUGAAGUCCAAUAGAGGGUUGUGCUUGGUUGAUCGAGCUGCUGAGCUAUGGAUCCCUCAGCCCCUAUCGCUAUCUCAUCAAUCAUAUCUAAAGCUGAUGGGCCUGUGGCUUGCAUAUCUCAGGAGAUUCAUCAACUGUUUUUGUUGAAUCCUUGUUUGGAUUGAAGGGAGCUCUA |