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BaseInfo

ncRNA ID novel_cmo_miR6
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr13:8727012-8727193 [-]
Reference genome Cmoschata_v1
Source SRR1632266
Length 21
Mature sequence(if miRNA) 1 - UUUGGAUUGAAGGGAGCUCUA - 21
Stem-loop(if miRNA) --         GA       UA       GU  ----U        C   -  G     C    G UC  U   C   U   -   AUCUCAUCA
  GAGCUCCUU  AGUCCAA  GAGGGUU  GC     UGGUUGAU GAG CU CUGAG UAUG A  CC CAG CCC AUC GCU         A
  |||||||||  |||||||  |||||||  ||     |||||||| ||| || ||||| |||| |  || ||| ||| ||| |||
  CUCGAGGGA  UUAGGUU  UUCCUAA  UG     GUCAACUA CUU GA GACUC AUAC U  GG GUC GGG UAG CGA         U
AU         AG       UG       GU  UUUUU        -   A  G     U    G UC  U   C   -   U   AAUCUAUAC
Stem-loop sequence GAGCUCCUUGAAGUCCAAUAGAGGGUUGUGCUUGGUUGAUCGAGCUGCUGAGCUAUGGAUCCCUCAGCCCCUAUCGCUAUCUCAUCAAUCAUAUCUAAAGCUGAUGGGCCUGUGGCUUGCAUAUCUCAGGAGAUUCAUCAACUGUUUUUGUUGAAUCCUUGUUUGGAUUGAAGGGAGCUCUA