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BaseInfo

ncRNA ID novel_cmo_miR5
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr13:5219796-5219905 [+]
Reference genome Cmoschata_v1
Source SRR1632266;SRR1632267
Length 24
Mature sequence(if miRNA) 1 - AAAAUUGAGACUUGAAAUGACGUG - 24
Stem-loop(if miRNA) --          C         -C            UG    -AGAAAU   GAUU
  AAAAUUGAGA UUGAAAUGA  GUGACAGUGAUC  AAAU       UGA    C
  |||||||||| |||||||||  ||||||||||||  ||||       |||
  UUUUAACUCU GACUUUACU  CAUUGUUACUGG  UUUG       ACU    G
GA          A         CA            GU    ACACAAU   ACAA
Stem-loop sequence AAAAUUGAGACUUGAAAUGACGUGACAGUGAUCUGAAAUAGAAAUUGAGAUUCGAACAUCAUAACACAGUUUUGGGUCAUUGUUACACUCAUUUCAGAUCUCAAUUUUAG