ncRNA ID | novel_bra_miR1018 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:1976673-1976840 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485284 |
Length | 24 |
Mature sequence(if miRNA) | 145 - AAAUGUUCCAAUGUAUGACUCUAU - 168 |
Stem-loop(if miRNA) |
--                 A                        --U   AAAA            AAA    CU   U  A    C   AAAUGUUCCAAUGUAUG CUCUAUAAUAGAGUUCCUCUAUUU   AGA    AAAAUAUAGAGG   GUUA  UUU CC UCUA A   ||||||||||||||||| ||||||||||||||||||||||||   |||    ||||||||||||   ||||  ||| || ||||   UUUACGAGGUUACAUAC GAGAUAUUAUCUCAAGGAGAUAAA   UCU    UUUUAUAUCUCU   CGAU  AAG GG AGAU U UU                 G                        UAU   ---C            AUA    AU   U  -    U |
Stem-loop sequence | AAAUGUUCCAAUGUAUGACUCUAUAAUAGAGUUCCUCUAUUUUAGAAAAAAAAAUAUAGAGGAAAGUUACUUUUUCCAUCUACAUUUAGAGGUGAAUAUAGCAUAUCUCUAUAUUUUCUCUUAUAAAUAGAGGAACUCUAUUAUAGAGGCAUACAUUGGAGCAUUUUU |