ncRNA ID | novel_bra_miR1017 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:18816473-18816598 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485284 |
Length | 23 |
Mature sequence(if miRNA) | 104 - CUCCCUCCGUUUCAUAAUAGAUG - 126 |
Stem-loop(if miRNA) |
--       C      UA        A      AUACU   -----CACA       ---     UU   CUCCCUC GUUUCA  AUAGAUGA GUUUUA     UUG         CAUAUUA   AGAAA  A   ||||||| ||||||  |||||||| ||||||     |||         |||||||   |||||   GAGGGAG CAAAGU  UAUCUACU CAAAAU     AAC         GUAUGAU   UCUUU  U AU       A      UA        A      CCACU   AAAAACAAA       AAA     UA |
Stem-loop sequence | CUCCCUCCGUUUCAUAAUAGAUGAAGUUUUAAUACUUUGCACACAUAUUAAGAAAUUAUAUUUUCUAAAUAGUAUGAAACAAAAACAAUCACCUAAAACAUCAUCUAUAUUGAAACAGAGGGAGUA |