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BaseInfo

ncRNA ID novel_bra_miR1017
Species Brassica rapa
Class miRNA
Genome position ChrA5:18816473-18816598 [-]
Reference genome Brapa_1.0
Source SRR1485284
Length 23
Mature sequence(if miRNA) 104 - CUCCCUCCGUUUCAUAAUAGAUG - 126
Stem-loop(if miRNA) --       C      UA        A      AUACU   -----CACA       ---     UU
  CUCCCUC GUUUCA  AUAGAUGA GUUUUA     UUG         CAUAUUA   AGAAA  A
  ||||||| ||||||  |||||||| ||||||     |||         |||||||   |||||
  GAGGGAG CAAAGU  UAUCUACU CAAAAU     AAC         GUAUGAU   UCUUU  U
AU       A      UA        A      CCACU   AAAAACAAA       AAA     UA
Stem-loop sequence CUCCCUCCGUUUCAUAAUAGAUGAAGUUUUAAUACUUUGCACACAUAUUAAGAAAUUAUAUUUUCUAAAUAGUAUGAAACAAAAACAAUCACCUAAAACAUCAUCUAUAUUGAAACAGAGGGAGUA