ncRNA ID | novel_bra_miR1016 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:15771369-15771520 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485284 |
Length | 23 |
Mature sequence(if miRNA) | 130 - CCAAUGUAUGUCUCUAUAAUAUA - 152 |
Stem-loop(if miRNA) |
--           C         U    UC       A   GG            AUAU         -AC     A   CCAAUGUAUGU UCUAUAAUA AGUU  UCUAUUU UAG  GAAAAUAUAGAG    GUUAUUUUU   CUCUA A   ||||||||||| ||||||||| ||||  ||||||| |||  ||||||||||||    |||||||||   |||||   GGUUACAUACA AGAUAUUAU UUAA  AGAUAAA AUC  CUUUUAUAUCUC    CAAUGAAAA   GAGAU U GA           A         U    GA       -   UA            CUUU         AUA     A |
Stem-loop sequence | CCAAUGUAUGUCUCUAUAAUAUAGUUUCUCUAUUUAUAGGGGAAAAUAUAGAGAUAUGUUAUUUUUACCUCUAAAUAUAGAGAUAAAAAGUAACUUUCCUCUAUAUUUUCAUCUAAAAUAGAAGAAUUUUAUUAUAGAAACAUACAUUGGAG |