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BaseInfo

ncRNA ID novel_bra_miR1016
Species Brassica rapa
Class miRNA
Genome position ChrA4:15771369-15771520 [-]
Reference genome Brapa_1.0
Source SRR1485284
Length 23
Mature sequence(if miRNA) 130 - CCAAUGUAUGUCUCUAUAAUAUA - 152
Stem-loop(if miRNA) --           C         U    UC       A   GG            AUAU         -AC     A
  CCAAUGUAUGU UCUAUAAUA AGUU  UCUAUUU UAG  GAAAAUAUAGAG    GUUAUUUUU   CUCUA A
  ||||||||||| ||||||||| ||||  ||||||| |||  ||||||||||||    |||||||||   |||||
  GGUUACAUACA AGAUAUUAU UUAA  AGAUAAA AUC  CUUUUAUAUCUC    CAAUGAAAA   GAGAU U
GA           A         U    GA       -   UA            CUUU         AUA     A
Stem-loop sequence CCAAUGUAUGUCUCUAUAAUAUAGUUUCUCUAUUUAUAGGGGAAAAUAUAGAGAUAUGUUAUUUUUACCUCUAAAUAUAGAGAUAAAAAGUAACUUUCCUCUAUAUUUUCAUCUAAAAUAGAAGAAUUUUAUUAUAGAAACAUACAUUGGAG