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BaseInfo

ncRNA ID novel_bra_miR1015
Species Brassica rapa
Class miRNA
Genome position ChrA4:17897150-17897321 [-]
Reference genome Brapa_1.0
Source SRR1485284
Length 24
Mature sequence(if miRNA) 149 - AACCUCACUCCAUAUUUUACUCCA - 172
Stem-loop(if miRNA) --                                            A    A    A     C            G       CAU
  AACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGG AAAU GAGU AUGAA AAAAAAUAAAAG AUUACUC   U
  |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||
  UUGGAGUGAGGUAUAAAAUGAGGUUUUAACUCUUUUACCUUACC UUUA CUCA UACUU UUUUUUAUUUUC UAAUGAG   U
GG                                            C    C    A     A            G       AUA
Stem-loop sequence AACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGGAAAAUAGAGUAAUGAACAAAAAAUAAAAGGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUAUUCAUAACUCCAUUUCCCAUUCCAUUUUCUCAAUUUUGGAGUAAAAUAUGGAGUGAGGUUGG