ncRNA ID | novel_bra_miR1015 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:17897150-17897321 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485284 |
Length | 24 |
Mature sequence(if miRNA) | 149 - AACCUCACUCCAUAUUUUACUCCA - 172 |
Stem-loop(if miRNA) |
--                                            A    A    A     C            G       CAU   AACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGG AAAU GAGU AUGAA AAAAAAUAAAAG AUUACUC   U   |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||   UUGGAGUGAGGUAUAAAAUGAGGUUUUAACUCUUUUACCUUACC UUUA CUCA UACUU UUUUUUAUUUUC UAAUGAG   U GG                                            C    C    A     A            G       AUA |
Stem-loop sequence | AACCUCACUCCAUAUUUUACUCCAAAAUUGAGAAAAUGGAGUGGAAAAUAGAGUAAUGAACAAAAAAUAAAAGGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUAUUCAUAACUCCAUUUCCCAUUCCAUUUUCUCAAUUUUGGAGUAAAAUAUGGAGUGAGGUUGG |