Search result

BaseInfo

ncRNA ID	novel_bra_miR1014
Species	Brassica rapa
Class	miRNA
Genome position	ChrA2:18613618-18613773 [-]
Reference genome	Brapa_1.0
Source	SRR1485284
Length	24
Mature sequence(if miRNA)	133 - AAACCCUUGGGCAAACUCUAAACC - 156
Stem-loop(if miRNA)	--          GC          C     A    U  --AU                      UC  AAAACCAUAAA   AAACCCUUGG  AAACUCUAAA CCUUG AUAA UC    ACUCUAAAUCAAAAACACUAAA  CU           C   ||||||||||  |||||||||| ||||| |||| ||    ||||||||||||||||||||||  ||   UUUGGGAACC  UUUGGGAUUU GGAAC UAUU AG    UGAGGUUUAGUUUUUGUGAUUU  GA           C UA          UA          A     C    U  GAUU                      GU  AUUCCCAAAUC
Stem-loop sequence	AAACCCUUGGGCAAACUCUAAACCCUUGAAUAAUUCAUACUCUAAAUCAAAAACACUAAAUCCUAAAACCAUAAACCCUAAACCCUUAAGUGUUUAGUGUUUUUGAUUUGGAGUUUAGGAUUUAUCCAAGGAUUUAGGGUUUAUCCAAGGGUUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009149586.2	ncRNA:24   CCAAAUCUCAAACGGGUUCCCAAA   1   *||||*|=|||||||||||||||| targets:1412   AGUUUCGGGUUUGCCCAAGGGUUU   1435 Target Full Sequence	2.0	PREDICTED: Brassica rapa uncharacterized LOC103871342 (LOC103871342), mRNA	uncharacterized LOC103871342(LOC103871342)	coding protein	psRNATarget