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BaseInfo

ncRNA ID novel_bra_miR1011
Species Brassica rapa
Class miRNA
Genome position ChrA6:4483849-4483901 [-]
Reference genome Brapa_1.0
Source SRR1485283
Length 24
Mature sequence(if miRNA) 30 - GUAAGGAGACGGGGCUGAGACACC - 53
Stem-loop(if miRNA) --   A  A  -    G        CC
  GUA GG GA CGGG CUGAGACA  A
  ||| || || |||| ||||||||
  CGU CC CU GCUU GACUUUGU  A
GC   C  C  A    G        AC
Stem-loop sequence GUAAGGAGACGGGGCUGAGACACCAACAUGUUUCAGGUUCGAUCCCCCUGCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009122723.2
ncRNA:24   CCACAGAGUCGGGGCAGAGGAAUG   1
  ||||||||||||||||||||||||
targets:77   GGUGUCUCAGCCCCGUCUCCUUAC   100

0.0 PREDICTED: Brassica rapa uncharacterized LOC103845834 (LOC103845834), mRNA uncharacterized LOC103845834(LOC103845834) coding protein psRNATarget