ncRNA ID | novel_bra_miR1009 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:13506100-13506214 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485283 |
Length | 24 |
Mature sequence(if miRNA) | 92 - GUAUGAGCCGGAUGACAGAAAUCA - 115 |
Stem-loop(if miRNA) |
-AU    -      A          U    AUA  GUUUUNNNNNNNNNNNNNNNNN    UUUC GUCAUC GGCUCAUACU UCCU   UU                      N    |||| |||||| |||||||||| ||||   ||                      N    AAAG CAGUAG CCGAGUAUGA GGGG   AG                      N ACU    A      G          C    GGG  GUUUUAUUANNNNNNNNNNNNN |
Stem-loop sequence | AUUUUCGUCAUCAGGCUCAUACUUUCCUAUAUUGUUUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAUUAUUUUGGAGGGGGGGCAGUAUGAGCCGGAUGACAGAAAUCA |