ncRNA ID | novel_bra_miR1002 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:32556712-32556829 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485283 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUAUAAGAAUCGGGCUAAGAAGC - 24 |
Stem-loop(if miRNA) |
--                        --CC   AA  ---AU   CUU     C UG    U   AUUAUAAGAAUCGGGCUAAGAAGC    GAU  UG     GCU   AUGUA C  AAAC U   ||||||||||||||||||||||||    |||  ||     |||   ||||| |  |||| C   UGAUGUUCUUGGUUUGGUUUUUCG    UUG  AC     CGG   UACAU G  UUUG U UU                        CUUU   AC  ACCCC   UUU     U --    A |
Stem-loop sequence | AUUAUAAGAAUCGGGCUAAGAAGCCCGAUAAUGAUGCUCUUAUGUACCUGAAACUUCUAGUUUGUUACAUUUUGGCCCCCACACAGUUUUUCGCUUUUUGGUUUGGUUCUUGUAGUUU |