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BaseInfo

ncRNA ID novel_bra_miR1002
Species Brassica rapa
Class miRNA
Genome position ChrA9:32556712-32556829 [+]
Reference genome Brapa_1.0
Source SRR1485283
Length 24
Mature sequence(if miRNA) 1 - AUUAUAAGAAUCGGGCUAAGAAGC - 24
Stem-loop(if miRNA) --                        --CC   AA  ---AU   CUU     C UG    U
  AUUAUAAGAAUCGGGCUAAGAAGC    GAU  UG     GCU   AUGUA C  AAAC U
  ||||||||||||||||||||||||    |||  ||     |||   ||||| |  |||| C
  UGAUGUUCUUGGUUUGGUUUUUCG    UUG  AC     CGG   UACAU G  UUUG U
UU                        CUUU   AC  ACCCC   UUU     U --    A
Stem-loop sequence AUUAUAAGAAUCGGGCUAAGAAGCCCGAUAAUGAUGCUCUUAUGUACCUGAAACUUCUAGUUUGUUACAUUUUGGCCCCCACACAGUUUUUCGCUUUUUGGUUUGGUUCUUGUAGUUU