ncRNA ID | novel_bra_miR998 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:16969721-16969860 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485282 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAUUCAUUUUCCGUCGGAACGU - 24 |
Stem-loop(if miRNA) |
--A        --           CC       --U   UC  UAUA        A              -  A    UUCCGACG  AAAUGAAUUUU  UCGGAAU   CCG  GG    UUCCGAGG AAUUCCGAGGAAGC CA A    ||||||||  |||||||||||  |||||||   |||  ||    |||||||| |||||||||||||| || U    AAGGCUGC  UUUACUUAAGA  AGCCUUA   GGC  CC    AAGGCUCC UUAAGGCUCCUUUG GU U UGC        CU           --       UAU   -U  -UUA        G              U  U |
Stem-loop sequence | AUUCCGACGAAAUGAAUUUUCCUCGGAAUUCCGUCGGUAUAUUCCGAGGAAAUUCCGAGGAAGCCAAAUUUUGUGUUUCCUCGGAAUUGCCUCGGAAAUUCCUCGGUAUAUUCCGAAGAAUUCAUUUUCCGUCGGAACGU |