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BaseInfo

ncRNA ID novel_bra_miR998
Species Brassica rapa
Class miRNA
Genome position ChrA6:16969721-16969860 [-]
Reference genome Brapa_1.0
Source SRR1485282
Length 24
Mature sequence(if miRNA) 1 - AGAAUUCAUUUUCCGUCGGAACGU - 24
Stem-loop(if miRNA) --A        --           CC       --U   UC  UAUA        A              -  A
   UUCCGACG  AAAUGAAUUUU  UCGGAAU   CCG  GG    UUCCGAGG AAUUCCGAGGAAGC CA A
   ||||||||  |||||||||||  |||||||   |||  ||    |||||||| |||||||||||||| || U
   AAGGCUGC  UUUACUUAAGA  AGCCUUA   GGC  CC    AAGGCUCC UUAAGGCUCCUUUG GU U
UGC        CU           --       UAU   -U  -UUA        G              U  U
Stem-loop sequence AUUCCGACGAAAUGAAUUUUCCUCGGAAUUCCGUCGGUAUAUUCCGAGGAAAUUCCGAGGAAGCCAAAUUUUGUGUUUCCUCGGAAUUGCCUCGGAAAUUCCUCGGUAUAUUCCGAAGAAUUCAUUUUCCGUCGGAACGU