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BaseInfo

ncRNA ID novel_bra_miR997
Species Brassica rapa
Class miRNA
Genome position ChrA5:11413222-11413361 [-]
Reference genome Brapa_1.0
Source SRR1485282
Length 24
Mature sequence(if miRNA) 1 - AGAAUUCAUUUUCCGUCGGAACGU - 24
Stem-loop(if miRNA) --A        --           CC       --U   UC     A        A              -  A
   UUCCGACG  AGAUGAAUUUU  UCGGAAU   CCG  GGAAU UUCCGAGG AAUUCCGAGGAAGC CA A
   ||||||||  |||||||||||  |||||||   |||  ||||| |||||||| |||||||||||||| || U
   AAGGCUGC  UUUACUUAAGA  AGCCUUA   GGC  CCUUA AAGGCUCC UUAAGGCUUCUUUG GU U
UGC        CU           --       UAU   -U     -        G              U  U
Stem-loop sequence AUUCCGACGAGAUGAAUUUUCCUCGGAAUUCCGUCGGAAUAUUCCGAGGAAAUUCCGAGGAAGCCAAAUUUUGUGUUUCUUCGGAAUUGCCUCGGAAAUUCCUCGGUAUAUUCCGAAGAAUUCAUUUUCCGUCGGAACGU