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BaseInfo

ncRNA ID novel_bra_miR993
Species Brassica rapa
Class miRNA
Genome position ChrA3:26163536-26163675 [+]
Reference genome Brapa_1.0
Source SRR1485282
Length 24
Mature sequence(if miRNA) 117 - AGAAUUCAUUUUCCGUCGGAACGU - 140
Stem-loop(if miRNA) --A        --           CC       --U   UC     G       GA         A    -  A
   UUCCGACG  AGAUGAAUUUU  UCGGAAU   CCG  GGAAU UUCCGAG  AAUUCCGAG AAGC CA A
   ||||||||  |||||||||||  |||||||   |||  ||||| |||||||  ||||||||| |||| || U
   AAGGCUGC  UUUACUUAAGA  AGCCUUA   GGC  CCUUA AAGGCUC  UUAAGGCUC UUUG GU U
UGC        CU           --       UAU   -U     -       UG         C    U  U
Stem-loop sequence AUUCCGACGAGAUGAAUUUUCCUCGGAAUUCCGUCGGAAUGUUCCGAGGAAAUUCCGAGAAAGCCAAAUUUUGUGUUUCCUCGGAAUUGUCUCGGAAAUUCCUCGGUAUAUUCCGAAGAAUUCAUUUUCCGUCGGAACGU