ncRNA ID | novel_bra_miR993 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:26163536-26163675 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485282 |
Length | 24 |
Mature sequence(if miRNA) | 117 - AGAAUUCAUUUUCCGUCGGAACGU - 140 |
Stem-loop(if miRNA) |
--A        --           CC       --U   UC     G       GA         A    -  A    UUCCGACG  AGAUGAAUUUU  UCGGAAU   CCG  GGAAU UUCCGAG  AAUUCCGAG AAGC CA A    ||||||||  |||||||||||  |||||||   |||  ||||| |||||||  ||||||||| |||| || U    AAGGCUGC  UUUACUUAAGA  AGCCUUA   GGC  CCUUA AAGGCUC  UUAAGGCUC UUUG GU U UGC        CU           --       UAU   -U     -       UG         C    U  U |
Stem-loop sequence | AUUCCGACGAGAUGAAUUUUCCUCGGAAUUCCGUCGGAAUGUUCCGAGGAAAUUCCGAGAAAGCCAAAUUUUGUGUUUCCUCGGAAUUGUCUCGGAAAUUCCUCGGUAUAUUCCGAAGAAUUCAUUUUCCGUCGGAACGU |