ncRNA ID | novel_bra_miR992 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:5098900-5099121 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485282 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AUUAAGGACCCAAGAGCAAGAAC - 23 |
Stem-loop(if miRNA) |
--C                                                     A       G      C                 C            UU  UUAAU    CUUGCUCUUGGGUCCUUAAUACACAUAUAUUUGUAUGUAUCUAUUAUAUAUGC UAUAUAA UGCGGG UAAGGACUUUACGGAAA CCAAACCGAAAG  CC     U    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||||  ||    GAACGAGAACCCAGGAAUUAUGUGUAUAUAAAUAUACAUAGAUAAUAUAUACG AUAUAUU ACGCCC AUUCCUGAAAUGCCUUU GGUUUGGCUUUC  GG     A CAA                                                     C       A      A                 A            CU  UGGUU |
Stem-loop sequence | CCUUGCUCUUGGGUCCUUAAUACACAUAUAUUUGUAUGUAUCUAUUAUAUAUGCAUAUAUAAGUGCGGGCUAAGGACUUUACGGAAACCCAAACCGAAAGUUCCUUAAUUAUUGGUGGUCCUUUCGGUUUGGAUUUCCGUAAAGUCCUUAACCCGCAAUUAUAUACGCAUAUAUAAUAGAUACAUAUAAAUAUAUGUGUAUUAAGGACCCAAGAGCAAGAAC |