Search result

BaseInfo

ncRNA ID novel_bra_miR981
Species Brassica rapa
Class miRNA
Genome position ChrA3:16947370-16947496 [-]
Reference genome Brapa_1.0
Source SRR1485280
Length 24
Mature sequence(if miRNA) 104 - AGAUACGGUCUCUUAGCUUUUAAC - 127
Stem-loop(if miRNA) --         -CUC                   -C    A            AAAAACC    
  AGAUACGGU    UUAGCUUUUAACUAAAAAA  UUAA AAACGUCUUUUA       UAAGA
  |||||||||    |||||||||||||||||||  |||| ||||||||||||       ||||A
  UCUAUGUCA    AAUUGAAAAUUGAUUUUUU  GAUU UUUGCAGAGAAU       AUUCA
AU         AAAA                   UC    C            AUAGAGA    
Stem-loop sequence AGAUACGGUCUCUUAGCUUUUAACUAAAAAACUUAAAAAACGUCUUUUAAAAAACCUAAGAAACUUAAGAGAUAUAAGAGACGUUUCUUAGCUUUUUUUAGUUAAAAGUUAAAAAAACUGUAUCUUA