ncRNA ID | novel_bra_miR973 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:26636968-26637064 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485280 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AUUACUCUCAGAAUCCCACUCCA - 23 |
Stem-loop(if miRNA) |
--    UA           G       A   CAA        C    U   GAGU  GGUUCUGAGAG AAUAUAA AAA   UUUCUUAA UUUU A   ||||  ||||||||||| ||||||| |||   |||||||| |||| A   CUCA  CUAAGACUCUC UUAUAUU UUU   AAAGAAUU AAAA U AC    CC           A       C   AAC        A    U |
Stem-loop sequence | GAGUUAGGUUCUGAGAGGAAUAUAAAAAACAAUUUCUUAACUUUUUAAUUAAAAAUUAAGAAACAAUUUCUUAUAUUACUCUCAGAAUCCCACUCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018654304.1 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC108869626 (LOC108869626), mRNA | NA | coding protein | psRNATarget |