ncRNA ID | novel_bra_miR969 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:8966545-8966735 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485280 |
Length | 24 |
Mature sequence(if miRNA) | 168 - AAAGAUGAAUCGUAAAAUAAACCC - 191 |
Stem-loop(if miRNA) |
--                 U              ---------AAA  UUGUGAAAUAAACACUCAACUUCAAUUCCGUUAACAUAUGUUACCCUCCCUC   AAAGAUGAAUCGUAAAA AAACCCUCAACUAA            UC                                                    U   ||||||||||||||||| ||||||||||||||            ||   UUUCUACUUAGCAUUUU UUUGGGAGUUGAUU            UA                                                    A GA                 U              CAAAAGUUGUAA  UUUGGGAGUUGAAUGUUUGGCAAUUGCAUACAGUGGGAGGCAGUGCCAAAAA |
Stem-loop sequence | AAAGAUGAAUCGUAAAAUAAACCCUCAACUAAAAAUCUUGUGAAAUAAACACUCAACUUCAAUUCCGUUAACAUAUGUUACCCUCCCUCUAAAAAACCGUGACGGAGGGUGACAUACGUUAACGGUUUGUAAGUUGAGGGUUUAUAAUGUUGAAAACUUAGUUGAGGGUUUUUUUUACGAUUCAUCUUUAG |