ncRNA ID | ath-miRf10808-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UCUCUCGCAAUAUUUGCGAGG - NA |
Stem-loop(if miRNA) |
     C            U            UUA   ----AUG    --U C GGAAG AGUCUCUCGCAA AUUUGCGAGGGA   GCA       UGCG   C G ||||| |||||||||||| ||||||||||||   |||       ||||   | CCUUC UUAGGGAGCGUU UAAACGCUCCCU   CGU       ACGU   G U      C            -            UAA   CUAUAAA    UCU G |
Stem-loop sequence | GGAAGCAGUCUCUCGCAAUAUUUGCGAGGGAUUAGCAAUGUGCGUCCGUGGUCUUGCAAAAUAUCUGCAAUUCCCUCGCAAAUUUGCGAGGGAUUCCUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK118042.1 |
|
2.5 | Arabidopsis thaliana At5g59810 mRNA for putative subtilisin-like protease, complete cds, clone: RAFL19-27-C18 | NA | coding protein | psRNATarget | |||||||||
NM_125373.3 |
|
2.5 | Arabidopsis thaliana Subtilase family protein (SBT5.4), mRNA | Subtilase family protein(SBT5.4) | coding protein | psRNATarget |