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BaseInfo

ncRNA ID ath-miRf10808-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UCUCUCGCAAUAUUUGCGAGG - NA
Stem-loop(if miRNA)      C            U            UUA   ----AUG    --U C
GGAAG AGUCUCUCGCAA AUUUGCGAGGGA   GCA       UGCG   C G
||||| |||||||||||| ||||||||||||   |||       ||||   |
CCUUC UUAGGGAGCGUU UAAACGCUCCCU   CGU       ACGU   G U
     C            -            UAA   CUAUAAA    UCU G
Stem-loop sequence GGAAGCAGUCUCUCGCAAUAUUUGCGAGGGAUUAGCAAUGUGCGUCCGUGGUCUUGCAAAAUAUCUGCAAUUCCCUCGCAAAUUUGCGAGGGAUUCCUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK118042.1
ncRNA:21   GGAGCGUUUAUAACGCUCUCU   1
  ==|*||||||||*||||||||
targets:119   UUUAGCAAAUAUAGCGAGAGA   139

2.5 Arabidopsis thaliana At5g59810 mRNA for putative subtilisin-like protease, complete cds, clone: RAFL19-27-C18 NA coding protein psRNATarget
NM_125373.3
ncRNA:21   GGAGCGUUUAUAACGCUCUCU   1
  ==|*||||||||*||||||||
targets:155   UUUAGCAAAUAUAGCGAGAGA   175

2.5 Arabidopsis thaliana Subtilase family protein (SBT5.4), mRNA Subtilase family protein(SBT5.4) coding protein psRNATarget