ncRNA ID | novel_bra_miR959 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:14527558-14527737 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485279 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAAAUCCUAAACCGCGUCCUAUG - 23 |
Stem-loop(if miRNA) |
--      A                                                                             A AA   UAGGAC CGGUUUAGGAUUUUGGAAUUCAUAUAUGAUCAGGGAUGAGGAAUAGGAAAAGUCAAAACUCAAACUCAGUGUUUCAA C  U   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  U   AUCCUG GCCAAAUCCUAAAACCUUAAGUAUAUACUAGUCCCUACUCCUUAUCCUUUUCAGUUUUGAGUUUGAGUCACAAAGUU G  U GU      C                                                                             - AA |
Stem-loop sequence | UAGGACACGGUUUAGGAUUUUGGAAUUCAUAUAUGAUCAGGGAUGAGGAAUAGGAAAAGUCAAAACUCAAACUCAGUGUUUCAAACAAUUUAAGUUGAAACACUGAGUUUGAGUUUUGACUUUUCCUAUUCCUCAUCCCUGAUCAUAUAUGAAUUCCAAAAUCCUAAACCGCGUCCUAUG |