ncRNA ID | novel_bra_miR956 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:5285026-5285086 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485278;SRR1485280 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUAAGAAAAACUAAGAACCGUCU - 24 |
Stem-loop(if miRNA) |
--    AG               U   AAA   ACUA  AAAAACUAAGAACCG CUA   A   ||||  ||||||||||||||| |||   A   UGAU  UUUUUGAUUCUUGGC GGU   U AU    CA               U   AAA |
Stem-loop sequence | ACUAAGAAAAACUAAGAACCGUCUAAAAAAUAAAUGGUCGGUUCUUAGUUUUUACUAGUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009151321.2 |
|
2.5 | PREDICTED: Brassica rapa AT-rich interactive domain-containing protein 6 (LOC103872878), mRNA | AT-rich interactive domain-containing protein 6(LOC103872878) | coding protein | psRNATarget |