ncRNA ID | novel_bra_miR955 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:19575704-19575773 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485278;SRR1485279 |
Length | 24 |
Mature sequence(if miRNA) | 47 - UGCAGCGCUGUGAGCCUGGGGCCC - 70 |
Stem-loop(if miRNA) |
----UG    G      --    GGG    -AA     G       CAGC CUGUGA  GCCU   GCCC   GGGGC G       |||| ||||||  ||||   ||||   ||||| G       GUUG GACACU  UGGG   CGGG   CCCUG U AGAUUA    -      GU    ---    GCA     A |
Stem-loop sequence | UGCAGCGCUGUGAGCCUGGGGCCCAAGGGGCGGGUAGUCCCACGGGGCGGGUUGUCACAGGUUGAUUAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009115088.2 |
|
0.0 | PREDICTED: Brassica rapa disease resistance protein TAO1-like (LOC103838637), mRNA | disease resistance protein TAO1-like(LOC103838637) | coding protein | psRNATarget |