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BaseInfo

ncRNA ID novel_bra_miR955
Species Brassica rapa
Class miRNA
Genome position ChrA7:19575704-19575773 [-]
Reference genome Brapa_1.0
Source SRR1485278;SRR1485279
Length 24
Mature sequence(if miRNA) 47 - UGCAGCGCUGUGAGCCUGGGGCCC - 70
Stem-loop(if miRNA) ----UG    G      --    GGG    -AA     G
      CAGC CUGUGA  GCCU   GCCC   GGGGC G
      |||| ||||||  ||||   ||||   ||||| G
      GUUG GACACU  UGGG   CGGG   CCCUG U
AGAUUA    -      GU    ---    GCA     A
Stem-loop sequence UGCAGCGCUGUGAGCCUGGGGCCCAAGGGGCGGGUAGUCCCACGGGGCGGGUUGUCACAGGUUGAUUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009115088.2
ncRNA:24   CCCGGGGUCCGAGUGUCGCGACGU   1
  *|*=||||||||||||||||||||
targets:1221   AGAUCCCAGGCUCACAGCGCUGCA   1244

0.0 PREDICTED: Brassica rapa disease resistance protein TAO1-like (LOC103838637), mRNA disease resistance protein TAO1-like(LOC103838637) coding protein psRNATarget