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BaseInfo

ncRNA ID	ath-miRf10807-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UGUCUUCAUCGUCAUCACAA - NA
Stem-loop(if miRNA)	U C      A       AUC           U   UUCAAA   A A    UU   GA  UU  G UCUUCU UGUCUUC   GUCAUCACAAA UUC      CUU A UAUC  AAG  CC  C  | |||||| |||||||   ||||||||||| |||      ||| | ||||  |||  ||  C AGGAGA AUAGAAG   CAGUAGUGUUU AAG      GAG U AUAG  UUC  GG  A A U      C       CAA           C   CAAUUA   A A    --   -A  CA
Stem-loop sequence	UGCUCUUCUAUGUCUUCAUCGUCAUCACAAAUUUCUUCAAACUUAAAUAUCUUAAGGACCUUCAACGGACUUGAUAAUAGAGAUUAACGAACUUUGUGAUGACAACGAAGAUACAGAGGAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001198322.1	ncRNA:20   AACA-CUACUGCUACUUCUGU   1   *|||-|||||||||||||||| targets:1042   AUGUUGAUGACGAUGAAGACA   1062 Target Full Sequence	2.0	Arabidopsis thaliana HIT zinc finger and PAPA-1-like domain-containing protein mRNA	HIT zinc finger and PAPA-1-like domain-containing protein(AT1G56460)	coding protein	psRNATarget
NM_104524.4	ncRNA:20   AACA-CUACUGCUACUUCUGU   1   *|||-|||||||||||||||| targets:939   AUGUUGAUGACGAUGAAGACA   959 Target Full Sequence	2.0	Arabidopsis thaliana HIT zinc finger and PAPA-1-like domain-containing protein mRNA	HIT zinc finger and PAPA-1-like domain-containing protein(AT1G56460)	coding protein	psRNATarget
NM_001333782.1	ncRNA:20   AACA-CUACUGCUACUUCUGU   1   *|||-|||||||||||||||| targets:955   AUGUUGAUGACGAUGAAGACA   975 Target Full Sequence	2.0	Arabidopsis thaliana HIT zinc finger and PAPA-1-like domain-containing protein partial mRNA	HIT zinc finger and PAPA-1-like domain-containing protein(AT1G56460)	coding protein	psRNATarget
AK117690.1	ncRNA:20   AACA-CUACUGCUACUUCUGU   1   *|||-|||||||||||||||| targets:857   AUGUUGAUGACGAUGAAGACA   877 Target Full Sequence	2.0	Arabidopsis thaliana At1g56460 mRNA for unknown protein, complete cds, clone: RAFL17-35-I23	NA	coding protein	psRNATarget
NM_001344692.1	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||||*|*||||||||||| targets:3820   UUGUGAGGCCGAUGAAGACA   3839 Target Full Sequence	2.5	Arabidopsis thaliana Disease resistance protein (TIR-NBS-LRR class) family mRNA	Disease resistance protein (TIR-NBS-LRR class) family(AT5G46520)	coding protein	psRNATarget
NM_124022.3	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||||*|*||||||||||| targets:3679   UUGUGAGGCCGAUGAAGACA   3698 Target Full Sequence	2.5	Arabidopsis thaliana Disease resistance protein (TIR-NBS-LRR class) family mRNA	Disease resistance protein (TIR-NBS-LRR class) family(AT5G46520)	coding protein	psRNATarget
AK226782.1	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||||*|*||||||||||| targets:3673   UUGUGAGGCCGAUGAAGACA   3692 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for disease resistance like protein, complete cds, clone: RAFL07-83-B22	NA	coding protein	psRNATarget
NM_001344688.1	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||||*|*||||||||||| targets:1494   UUGUGAAGCCGAUGAAGACA   1513 Target Full Sequence	2.5	Arabidopsis thaliana protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein mRNA	protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein(AT5G46500)	coding protein	psRNATarget
NM_001344687.1	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||||*|*||||||||||| targets:1028   UUGUGAAGCCGAUGAAGACA   1047 Target Full Sequence	2.5	Arabidopsis thaliana protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein partial mRNA	protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein(AT5G46500)	coding protein	psRNATarget
NM_001344689.1	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||||*|*||||||||||| targets:1028   UUGUGAAGCCGAUGAAGACA   1047 Target Full Sequence	2.5	Arabidopsis thaliana protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein partial mRNA	protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein(AT5G46500)	coding protein	psRNATarget
NM_104236.5	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||*||||*|||||||||| targets:1252   UUGUUAUGAAGAUGAAGACA   1271 Target Full Sequence	2.5	Arabidopsis thaliana glyoxalase II 3 (GLY3), mRNA	glyoxalase II 3(GLY3)	coding protein	psRNATarget
NM_001344690.1	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||||*|*||||||||||| targets:995   UUGUGAAGCCGAUGAAGACA   1014 Target Full Sequence	2.5	Arabidopsis thaliana protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein partial mRNA	protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein(AT5G46500)	coding protein	psRNATarget
NM_202289.3	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||*||||*|||||||||| targets:1128   UUGUUAUGAAGAUGAAGACA   1147 Target Full Sequence	2.5	Arabidopsis thaliana glyoxalase II 3 (GLY3), mRNA	glyoxalase II 3(GLY3)	coding protein	psRNATarget
U74610.1	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||*||||*|||||||||| targets:1008   UUGUUAUGAAGAUGAAGACA   1027 Target Full Sequence	2.5	Arabidopsis thaliana putative glyoxalase II mRNA, complete cds	NA	coding protein	psRNATarget
BX817566.1	ncRNA:20   AACACUACUGCUACUUCUGU   1   ||||*||||*|||||||||| targets:719   UUGUUAUGAAGAUGAAGACA   738 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL30ZD10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget