ncRNA ID | novel_bra_miR952 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:11294589-11294721 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485278 |
Length | 23 |
Mature sequence(if miRNA) | 111 - GACGGACGACUGAAUUGUAAGUC - 133 |
Stem-loop(if miRNA) |
--                   C                           A   UUAUUC     UUCU  U   UUUACAAUUCAGUCGUCCG CCGACGACUUACAUGUAAGUCGUCCAG AUU      UGAGA    GG C   ||||||||||||||||||| ||||||||||||||||||||||||||| |||      |||||    || A   GAAUGUUAAGUCAGCAGGC GGUUGCUGAAUGUACAUUCAGCAGGUC UAA      AUUCU    CC A CU                   A                           C   ------     ----  A |
Stem-loop sequence | UUUACAAUUCAGUCGUCCGCCCGACGACUUACAUGUAAGUCGUCCAGAAUUUUAUUCUGAGAUUCUGGUCAAACCUCUUAAAUCCUGGACGACUUACAUGUAAGUCGUUGGACGGACGACUGAAUUGUAAGUC |