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BaseInfo

ncRNA ID novel_bra_miR952
Species Brassica rapa
Class miRNA
Genome position ChrA5:11294589-11294721 [+]
Reference genome Brapa_1.0
Source SRR1485278
Length 23
Mature sequence(if miRNA) 111 - GACGGACGACUGAAUUGUAAGUC - 133
Stem-loop(if miRNA) --                   C                           A   UUAUUC     UUCU  U
  UUUACAAUUCAGUCGUCCG CCGACGACUUACAUGUAAGUCGUCCAG AUU      UGAGA    GG C
  ||||||||||||||||||| ||||||||||||||||||||||||||| |||      |||||    || A
  GAAUGUUAAGUCAGCAGGC GGUUGCUGAAUGUACAUUCAGCAGGUC UAA      AUUCU    CC A
CU                   A                           C   ------     ----  A
Stem-loop sequence UUUACAAUUCAGUCGUCCGCCCGACGACUUACAUGUAAGUCGUCCAGAAUUUUAUUCUGAGAUUCUGGUCAAACCUCUUAAAUCCUGGACGACUUACAUGUAAGUCGUUGGACGGACGACUGAAUUGUAAGUC