ncRNA ID | novel_bra_miR951 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:10911185-10911284 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485278;SRR1485283 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACCCGAUCCGGACACUGAACCG - 24 |
Stem-loop(if miRNA) |
--     -    A  U          ----U    UUC   CAGU    UGGUU   GUUCA UGUU UG GGUCGGGUUU     CAUU   UGC    GGCA     U   ||||| |||| || ||||||||||     ||||   |||    ||||     U   CAAGU ACAG GC CUAGCCCAAA     GUAA   AUG    CUGU     G GC     C    -  -          UUUUU    CUA   --AU    UAAAU |
Stem-loop sequence | GUUCAUGUUAUGUGGUCGGGUUUUCAUUUUCUGCCAGUGGCAUGGUUUUGUAAAUUGUCUAGUAAUCAAUGUUUUUAAACCCGAUCCGGACACUGAACCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009121393.2 |
|
2.0 | PREDICTED: Brassica rapa chitinase 10 (LOC103844592), mRNA | chitinase 10(LOC103844592) | coding protein | psRNATarget |