ncRNA ID | novel_bra_miR947 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:28790411-28790508 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485278;SRR1485282;SRR1485283 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUCGUGAUGGCGGACACCUCAGC - 24 |
Stem-loop(if miRNA) |
--                 C          AU      ACU   AAA  A   ACUCGUGAUGGCGGACA CUCAGCCGAG  UUCUUU   ACC   CU C   ||||||||||||||||| ||||||||||  ||||||   |||   ||   UGAGCACUACCGCCUGU GAGUCGGCUC  AAGAAA   UGG   GG G GG                 A          -C      -AU   CCC  A |
Stem-loop sequence | ACUCGUGAUGGCGGACACCUCAGCCGAGAUUUCUUUACUACCAAACUACGAGGCCCGGUUAAAAGAACCUCGGCUGAGAUGUCCGCCAUCACGAGUGG |