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BaseInfo

ncRNA ID	novel_bra_miR946
Species	Brassica rapa
Class	miRNA
Genome position	ChrA3:23937241-23937328 [+]
Reference genome	Brapa_1.0
Source	SRR1485278
Length	24
Mature sequence(if miRNA)	1 - AAACCCUAAACUCUUGAAUAAAUC - 24
Stem-loop(if miRNA)	--                        AU  -- UUUUAAAGUUUA   AAACCCUAAACUCUUGAAUAAAUC  AA  A            A   ||||||||||||||||||||||||  ||  |            G   UUUGGGAUUUGGGAACUUAUUUAG  CU  G            A CA                        -G  UU AGAACCUAGUUU
Stem-loop sequence	AAACCCUAAACUCUUGAAUAAAUCAUAAAUUUUAAAGUUUAAGAUUUGAUCCAAGAGUUUCGGAUUUAUUCAAGGGUUUAGGGUUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009133348.2	ncRNA:24   CUAAAU-AAGUUCUCAAAUCCCAAA   1   ||||||-||*||||||||||||||| targets:519   GAUUUAGUUAAAGAGUUUAGGGUUU   543 Target Full Sequence	3.0	PREDICTED: Brassica rapa putative F-box protein At4g38870 (LOC103856250), mRNA	putative F-box protein At4g38870(LOC103856250)	coding protein	psRNATarget
XM_009108136.2	ncRNA:24   CUAA-AUAAGUUCUCAAAUCCCAAA   1   |=||-|=||=*|||||||||||||| targets:1103   GGUUAUGUUUCAGAGUUUAGGGUUU   1127 Target Full Sequence	3.0	PREDICTED: Brassica rapa sugar transport protein 14 (LOC103832173), mRNA	sugar transport protein 14(LOC103832173)	coding protein	psRNATarget