ncRNA ID | novel_bra_miR927 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:8002432-8002545 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1160826 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAAGGACCUAAGAACAAAGACUCC - 24 |
Stem-loop(if miRNA) |
--    A                                                 C   GGUC UUGUUCUUGGGUCCUUAAUAUACAUAUAUUUGUAUGUAUAUAUUAUAUA G   |||| |||||||||||||||||||||||||||||||||||||||||||||||||   UCAG AACAAGAAUCCAGGAAUUAUAUGUAUAUAAACAUACAUAUAUAAUAUAU C CC    A                                                 A |
Stem-loop sequence | GGUCAUUGUUCUUGGGUCCUUAAUAUACAUAUAUUUGUAUGUAUAUAUUAUAUACGCAUAUAUAAUAUAUACAUACAAAUAUAUGUAUAUUAAGGACCUAAGAACAAAGACUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009120411.2 |
|
3.0 | PREDICTED: Brassica rapa uncharacterized LOC103843663 (LOC103843663), mRNA | uncharacterized LOC103843663(LOC103843663) | coding protein | psRNATarget |