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BaseInfo

ncRNA ID novel_bra_miR927
Species Brassica rapa
Class miRNA
Genome position ChrA6:8002432-8002545 [-]
Reference genome Brapa_1.0
Source SRR1160826
Length 24
Mature sequence(if miRNA) 1 - UAAGGACCUAAGAACAAAGACUCC - 24
Stem-loop(if miRNA) --    A                                                 C
  GGUC UUGUUCUUGGGUCCUUAAUAUACAUAUAUUUGUAUGUAUAUAUUAUAUA G
  |||| |||||||||||||||||||||||||||||||||||||||||||||||||
  UCAG AACAAGAAUCCAGGAAUUAUAUGUAUAUAAACAUACAUAUAUAAUAUAU C
CC    A                                                 A
Stem-loop sequence GGUCAUUGUUCUUGGGUCCUUAAUAUACAUAUAUUUGUAUGUAUAUAUUAUAUACGCAUAUAUAAUAUAUACAUACAAAUAUAUGUAUAUUAAGGACCUAAGAACAAAGACUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009120411.2
ncRNA:24   CCUC-AGAAACAAGAAUCCAGGAAU   1
  *|||-|||*||*||||||||||||=
targets:771   UGAGAUCUCUGGUCUUAGGUCCUUG   795

3.0 PREDICTED: Brassica rapa uncharacterized LOC103843663 (LOC103843663), mRNA uncharacterized LOC103843663(LOC103843663) coding protein psRNATarget