ncRNA ID | novel_bra_miR923 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:1232394-1232482 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485276 |
Length | 24 |
Mature sequence(if miRNA) | 66 - UCUCAACUUUAAUUCUGUUAACGU - 89 |
Stem-loop(if miRNA) |
--           A  C      C  A   --         ACGG   UCUCAACUUUA UU UGUUAA GU UGU  CCCUCCGUU    U   ||||||||||| || |||||| || |||  |||||||||    A   GGAGUUGAAAU AA ACAAUU CA ACA  GGGAGGUAG    U UC           C  A      A  A   GU         AUUU |
Stem-loop sequence | UCUCAACUUUAAUUCUGUUAACGUAUGUCCCUCCGUUACGGUAUUUUAGAUGGAGGGUGACAAACAUUAACAAAACUAAAGUUGAGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018652943.1 |
|
2.5 | PREDICTED: Brassica rapa probable acyl-activating enzyme 12, peroxisomal (LOC108869021), mRNA | NA | coding protein | psRNATarget |