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BaseInfo

ncRNA ID novel_bra_miR923
Species Brassica rapa
Class miRNA
Genome position ChrA8:1232394-1232482 [-]
Reference genome Brapa_1.0
Source SRR1485276
Length 24
Mature sequence(if miRNA) 66 - UCUCAACUUUAAUUCUGUUAACGU - 89
Stem-loop(if miRNA) --           A  C      C  A   --         ACGG
  UCUCAACUUUA UU UGUUAA GU UGU  CCCUCCGUU    U
  ||||||||||| || |||||| || |||  |||||||||    A
  GGAGUUGAAAU AA ACAAUU CA ACA  GGGAGGUAG    U
UC           C  A      A  A   GU         AUUU
Stem-loop sequence UCUCAACUUUAAUUCUGUUAACGUAUGUCCCUCCGUUACGGUAUUUUAGAUGGAGGGUGACAAACAUUAACAAAACUAAAGUUGAGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018652943.1
ncRNA:24   UGCAAUUGUCUUAAUUUCAACUCU   1
  ||*|*|||||*|||=|||||||||
targets:524   ACAUCAACAGUAUUGAAGUUGAGA   547

2.5 PREDICTED: Brassica rapa probable acyl-activating enzyme 12, peroxisomal (LOC108869021), mRNA NA coding protein psRNATarget