| ncRNA ID | novel_bra_miR922 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA4:4924118-4924303 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1485275 |
| Length | 22 |
| Mature sequence(if miRNA) | 165 - UUGGUUUGUUCGGUUUGAAUCC - 186 |
| Stem-loop(if miRNA) |
-- A A - CA A AUUCAAACC AACAAACCAAGCUCGGUCACCAUGCAUACACGCCGUCUG UCGCUAUGUAGCAAC AAACCUGAGC AAGCUCGGUCGCU C ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| UAAGUUUGG UUGUUUGGUUCGAGCCAGUGGUGCGUAUGUGCGGCAGGC AGCGAUACGUCGUUG UUUGGGCUCG UUCGAGCCAGCGA G CC C C G -C U |
| Stem-loop sequence | AUUCAAACCAAACAAACCAAGCUCGGUCACCAUGCAUACACGCCGUCUGAUCGCUAUGUAGCAACAAACCUGAGCCAAAGCUCGGUCGCUACGUAGCGACCGAGCUUCGCUCGGGUUUGGUUGCUGCAUAGCGACCGGACGGCGUGUAUGCGUGGUGACCGAGCUUGGUUUGUUCGGUUUGAAUCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009148405.2 |
|
2.5 | PREDICTED: Brassica rapa kinesin-like protein KIN-7K, chloroplastic (LOC103870285), mRNA | kinesin-like protein KIN-7K, chloroplastic(LOC103870285) | coding protein | psRNATarget | |||||||||
| XM_009136148.2 |
|
2.5 | PREDICTED: Brassica rapa small nuclear ribonucleoprotein Sm D1 (LOC103858735), mRNA | small nuclear ribonucleoprotein Sm D1(LOC103858735) | coding protein | psRNATarget |