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BaseInfo

ncRNA ID	novel_bra_miR917
Species	Brassica rapa
Class	miRNA
Genome position	ChrA7:10531996-10532149 [+]
Reference genome	Brapa_1.0
Source	SRR1485274
Length	22
Mature sequence(if miRNA)	133 - UUAUAAAGUGAACCAUUGGAGC - 154
Stem-loop(if miRNA)	--                                                         C         UC     A   UCCAAUGGUUCACUUUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAUU UUGUUUUUU  CUCUA A   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||   AGGUUACCAAGUGAAAUAUUAUCUCAAUGAGAUAUUAUCUCACUUUAUAUCUCAUAA AACAAAAAA  GAGAU U CG                                                         A         GU     A
Stem-loop sequence	UCCAAUGGUUCACUUUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAUUCUUGUUUUUUUCCUCUAAAUAUAGAGUGAAAAAACAAAAAUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAAAGUGAACCAUUGGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009105542.1	ncRNA:22   CGAGGUUACCAAGUGAAAUAUU   1   *|*||||*|||||||||*|||| targets:1349   UCACCAAGGGUUCACUUCAUAA   1370 Target Full Sequence	2.5	PREDICTED: Brassica rapa putative pumilio homolog 8, chloroplastic (LOC103829851), mRNA	putative pumilio homolog 8, chloroplastic(LOC103829851)	coding protein	psRNATarget