ncRNA ID | novel_bra_miR915 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:17880358-17880449 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1160826 |
Length | 21 |
Mature sequence(if miRNA) | 72 - GCUCACUCUCUAUCUGUCACC - 92 |
Stem-loop(if miRNA) |
--       -                    GGCU   UU    -  UUG   UGACAGA AGAGAGUGAGCACACAUGGU    UUC  GCAU AU   A   ||||||| ||||||||||||||||||||    |||  |||| ||   ACUGUCU UCUCUCACUCGUGUGUAUCG    AAG  CGUA UG   A CC       A                    ----   UU    C  UAG |
Stem-loop sequence | UGACAGAAGAGAGUGAGCACACAUGGUGGCUUUCUUGCAUAUUUGAAGAUGUCAUGCUUGAAGCUAUGUGUGCUCACUCUCUAUCUGUCACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009147669.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103869591 (LOC103869591), mRNA | uncharacterized LOC103869591(LOC103869591) | coding protein | psRNATarget |