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BaseInfo

ncRNA ID novel_bra_miR915
Species Brassica rapa
Class miRNA
Genome position ChrA6:17880358-17880449 [+]
Reference genome Brapa_1.0
Source SRR1160826
Length 21
Mature sequence(if miRNA) 72 - GCUCACUCUCUAUCUGUCACC - 92
Stem-loop(if miRNA) --       -                    GGCU   UU    -  UUG
  UGACAGA AGAGAGUGAGCACACAUGGU    UUC  GCAU AU   A
  ||||||| ||||||||||||||||||||    |||  |||| ||
  ACUGUCU UCUCUCACUCGUGUGUAUCG    AAG  CGUA UG   A
CC       A                    ----   UU    C  UAG
Stem-loop sequence UGACAGAAGAGAGUGAGCACACAUGGUGGCUUUCUUGCAUAUUUGAAGAUGUCAUGCUUGAAGCUAUGUGUGCUCACUCUCUAUCUGUCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009147669.2
ncRNA:21   CCACUGUCUAUCUCUCACUCG   1
  **|*||||||||||||*||||
targets:31   AUUUACAGAUAGAGAGAGAGC   51

2.5 PREDICTED: Brassica rapa uncharacterized LOC103869591 (LOC103869591), mRNA uncharacterized LOC103869591(LOC103869591) coding protein psRNATarget