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BaseInfo

ncRNA ID	ath-miRf10803-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UGGUUGAGUGCGGAAUGGAGAAGAC - NA
Stem-loop(if miRNA)	UG         G G AAUGGAGA G   G GAA     -  G  G G   G          -GGAA   GAGU UG  UGGUUGAGU C G        A ACA U   GCUGG CA UC A UAU AAGUCGAGUA     GUC    G ||  ||||||||| | |        | ||| |   ||||| || || | ||| ||||||||||     ||| AU  GCCGACUCA G U        U UGU A   UGGCU GU AG U GUG UUCGGCUCAU     UAG    A   GU         G G GGUAGUAG G   G -GC     A  G  A G   G          GGUGG   AGGU
Stem-loop sequence	UGUGUGGUUGAGUGCGGAAUGGAGAAGACAGUGAAGCUGGCAGUCGAGUAUGAAGUCGAGUAGGAAGUCGAGUGAUGGAGAUGGUGGUACUCGGCUUGGUGGUAGAGUGAUCGGUCGAGUGUGUGAUGAUGGUGGGACUCAGCCGUGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183191.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   ||||||||||||||||||||||||| targets:1149   GUCUUCUCCAUUCCGCACUCAACCA   1173 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   ||||||||||||||||||||||||| targets:1101   GUCUUCUCCAUUCCGCACUCAACCA   1125 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   ||||||||||||||||||||||||| targets:774   GUCUUCUCCAUUCCGCACUCAACCA   798 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   ||||||||||||||||||||||||| targets:409   GUCUUCUCCAUUCCGCACUCAACCA   433 Target Full Sequence	0.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   |*|||||=||||||||||||||||| targets:1803   GCCUUCUUCAUUCCGCACUCAACCA   1827 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   |*|||||=||||||||||||||||| targets:994   GCCUUCUUCAUUCCGCACUCAACCA   1018 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
BT012022.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   *||*|||||||||=||||||||||| targets:132   CUCGUCUCCAUUCUGCACUCAACCA   156 Target Full Sequence	1.5	Arabidopsis thaliana At2g10890 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   ||||*|||*|*|||||||||||||| targets:379   GUCUACUCAAAUCCGCACUCAACCA   403 Target Full Sequence	2.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   ||||*|||*|*|||||||||||||| targets:379   GUCUACUCAAAUCCGCACUCAACCA   403 Target Full Sequence	2.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:25   CAGAAGAGGUAAGGCGUGAGUUGGU   1   |*|||||=|||||=||||||||||| targets:643   GCCUUCUUCAUUCUGCACUCAACCA   667 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget