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BaseInfo

ncRNA ID novel_bra_miR911
Species Brassica rapa
Class miRNA
Genome position ChrA1:1010499-1010609 [+]
Reference genome Brapa_1.0
Source SRR1485274
Length 22
Mature sequence(if miRNA) 90 - UGGUCUCAGCCAAAACUACUCC - 111
Stem-loop(if miRNA) --      C  U  -     U    U   UUU         -  UAU     AG  AU
  AGUAGU UU GC GGGAC CAUC CAG   AAAAGGCAU CG   UAUUC  AA  G
  |||||| || || ||||| |||| |||   ||||||||| ||   |||||  ||
  UCAUCA AA CG CUCUG GUAG GUC   UUUUCUGUA GU   GUAAG  UU  U
CC      A  C  A     -    U   UUC         U  --U     GG  GA
Stem-loop sequence AGUAGUCUUUGCGGGACUCAUCUCAGUUUAAAAGGCAUCGUAUUAUUCAGAAAUGUAGUUGGGAAUGUUGUAUGUCUUUUCUUCUGUGAUGGUCUCAGCCAAAACUACUCC