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BaseInfo

ncRNA ID novel_bra_miR909
Species Brassica rapa
Class miRNA
Genome position ChrA9:26492805-26493024 [-]
Reference genome Brapa_1.0
Source SRR1485274
Length 24
Mature sequence(if miRNA) 1 - ACUAAGGACCCAAGACCAAGGACC - 24
Stem-loop(if miRNA) --                                                 A                                                U        A
  UCCUUGGUCUUGGGUCCUUAGUACACAUAUAUUUGUAUGUAUAUAUUAU UAUGCGUAUAUAUUUGCGGGCUAAGGACUUUACGGAAACCCAAACCGA AGUUCCUU A
  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
  AGGAACCAGAACCCAGGAAUCAUGUGUGUAUAAACAUACAUAUAUAAUA AUACGCAUAUAUAAACGCCCGAUUCCUGAAAUGCCUUUGGGUUUGGUU UCAAGGAA U
CC                                                 G                                                U        U
Stem-loop sequence UCCUUGGUCUUGGGUCCUUAGUACACAUAUAUUUGUAUGUAUAUAUUAUAUAUGCGUAUAUAUUUGCGGGCUAAGGACUUUACGGAAACCCAAACCGAUAGUUCCUUAAUUAAGGAACUUUUGGUUUGGGUUUCCGUAAAGUCCUUAGCCCGCAAAUAUAUACGCAUAGAUAAUAUAUACAUACAAAUAUGUGUGUACUAAGGACCCAAGACCAAGGACC