ncRNA ID | novel_bra_miR907 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:26492810-26493029 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485274 |
Length | 24 |
Mature sequence(if miRNA) | 197 - ACUAAGGACCCAAGACCAAGGACC - 220 |
Stem-loop(if miRNA) |
--                           C                     C                                              AAA        A   UCCUUGGUCUUGGGUCCUUAGUACACA AUAUUUGUAUGUAUAUAUUAU UAUGCGUAUAUAUUUGCGGGCUAAGGACUUUACGGAAACCCAAACC   AGUUCCUU A   ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||   AGGAACCAGAACCCAGGAAUCAUGUGU UAUAAACAUACAUAUAUAAUA AUACGCAUAUAUAAACGCCCGAUUCCUGAAAUGCCUUUGGGUUUGG   UCAAGGAA U CC                           A                     U                                              CUA        U |
Stem-loop sequence | UCCUUGGUCUUGGGUCCUUAGUACACACAUAUUUGUAUGUAUAUAUUAUCUAUGCGUAUAUAUUUGCGGGCUAAGGACUUUACGGAAACCCAAACCAAAAGUUCCUUAAUUAAGGAACUAUCGGUUUGGGUUUCCGUAAAGUCCUUAGCCCGCAAAUAUAUACGCAUAUAUAAUAUAUACAUACAAAUAUAUGUGUACUAAGGACCCAAGACCAAGGACC |