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BaseInfo

ncRNA ID	novel_bra_miR903
Species	Brassica rapa
Class	miRNA
Genome position	ChrA5:3222226-3222314 [-]
Reference genome	Brapa_1.0
Source	SRR1160826
Length	24
Mature sequence(if miRNA)	66 - UGUAUGCCUGGCUCCCUGUAUGCC - 89
Stem-loop(if miRNA)	--U      C       CU         C U UA  C           GUAUGC UGGCUCC  GUAUGCCAU C C  AG UCAUCGAC    |||||| |||||||  ||||||||| | |  || |||||||C    UAUACG ACCGAGG  UAUGCGGUA G G  UC AGUAGUUA UUU      U       AG         A U CC  C
Stem-loop sequence	UGUAUGCCUGGCUCCCUGUAUGCCAUCCUCUAAGCUCAUCGACCAUUGAUGACCUCCGUGAAUGGCGUAUGAGGAGCCAUGCAUAUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JN979477.1	ncRNA:24   CCGUAUGUCCCUCGGUCCGUAUGU   1   ||=*||||||||||||||||||** targets:1297   GGUUUACAGGGAGCCAGGCAUAAU   1320 Target Full Sequence	2.5	Brassica rapa subsp. pekinensis auxin response factor 16-1 (ARF16-1) mRNA, complete cds	NA	coding protein	psRNATarget
JN979478.1	ncRNA:24   CCGUAUGUCCCUCGGUCCGUAUGU   1   ||=*||||||||||||||||||** targets:1441   GGUUUACAGGGAGCCAGGCAUAAU   1464 Target Full Sequence	2.5	Brassica rapa subsp. pekinensis auxin response factor 16-2 (ARF16-2) mRNA, complete cds	NA	coding protein	psRNATarget
XM_009129881.2	ncRNA:24   CCGUAUGUCCCUCGGUCCGUAUGU   1   ||=*||||||||||||||||||** targets:1536   GGUUUACAGGGAGCCAGGCAUAAU   1559 Target Full Sequence	2.5	PREDICTED: Brassica rapa auxin response factor 16 (ARF16-1), mRNA	auxin response factor 16(ARF16-1)	coding protein	psRNATarget
XM_009139640.2	ncRNA:24   CCGUAUGUCCCUCGGUCCGUAUGU   1   ||=*||||||||||||||||||** targets:1524   GGUUUACAGGGAGCCAGGCAUAAU   1547 Target Full Sequence	2.5	PREDICTED: Brassica rapa auxin response factor 16 (ARF16-2), mRNA	auxin response factor 16(ARF16-2)	coding protein	psRNATarget