ncRNA ID | novel_bra_miR898 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:10126328-10126426 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485270 |
Length | 24 |
Mature sequence(if miRNA) | 76 - UCAUCACUCCAUUUCCCACUCCAU - 99 |
Stem-loop(if miRNA) |
--                                                  GGAGUGGGAAAUGGAGUGAUGAACAAAAAAUAAAAGGAUUACUCUAUU   |||||||||||||||||||||||||||||||||||||||||||||||U   CCUCACCCUUUACCUCACUACUUGUUUUUUAUUUUCCUAAUGAGGUAU UA                                                |
Stem-loop sequence | GGAGUGGGAAAUGGAGUGAUGAACAAAAAAUAAAAGGAUUACUCUAUUUUAUGGAGUAAUCCUUUUAUUUUUUGUUCAUCACUCCAUUUCCCACUCCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009132814.2 |
|
1.5 | PREDICTED: Brassica rapa alpha-galactosidase 1 (LOC103855780), mRNA | alpha-galactosidase 1(LOC103855780) | coding protein | psRNATarget | |||||||||
XM_009127480.2 |
|
2.5 | PREDICTED: Brassica rapa alpha-galactosidase 1 (LOC103850695), mRNA | alpha-galactosidase 1(LOC103850695) | coding protein | psRNATarget |