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BaseInfo

ncRNA ID ath-miRf10800-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CAUUAUCACAGUACUAUGAU - NA
Stem-loop(if miRNA)     -                                ---       -AAAG  U    GGU
UCAU AGUCAUUAUCACAGUACUAUGAUUAUGAAUUG   CAUGCAU     UA GUUU   A
|||| ||||||||||||||||||||||||||||||||   |||||||     || ||||   A
AGUG UCAGUAAUAGUGUCAUGAUACUAAUACUUAAU   GUAUGUG     AU UAAA   G
    A                                CUG       AUAAA  U    AUA
Stem-loop sequence UCAUAGUCAUUAUCACAGUACUAUGAUUAUGAAUUGCAUGCAUAAAGUAUGUUUGGUAAGAUAAAAUUUAAAAUAGUGUAUGGUCUAAUUCAUAAUCAUAGUACUGUGAUAAUGACUAGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_115847.4
ncRNA:20   UAGUAUCAUGACACUAUUAC   1
  ||||||||||||||||||||
targets:13   AUCAUAGUACUGUGAUAAUG   32

0.0 Arabidopsis thaliana Zinc-binding dehydrogenase family protein mRNA Zinc-binding dehydrogenase family protein(AT3G59845) coding protein psRNATarget