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BaseInfo

ncRNA ID	novel_bra_miR884
Species	Brassica rapa
Class	miRNA
Genome position	ChrA5:10141534-10141726 [+]
Reference genome	Brapa_1.0
Source	SRR1160826
Length	24
Mature sequence(if miRNA)	170 - AUCUCCACCCCUUAACUCUAAACC - 193
Stem-loop(if miRNA)	--    A         -    AU    AGAAUAU    -ACAAG      AAAAUUAAAAAUUAAAAUUUUCAAAAUAAAAAUAAGCUAUUUUAAUCAAUU   UUUA AGUUAAGGG UGGA  UUUG       GGUU      UUUUAA                                                   U   |||| ||||||||| ||||  ||||       ||||      ||||||   AAAU UCAAUUCCC ACCU  AAAC       CCAA      AAUUUU                                                   U CC    C         C    CU    -------    AUUCUA      AAAAUAUUUUAUCUUUUAUUUAUAAAAAAAUAGUGUUUUAUCGUAAGUUAU
Stem-loop sequence	UUUAAAGUUAAGGGUGGAAUUUUGAGAAUAUGGUUACAAGUUUUAAAAAAUUAAAAAUUAAAAUUUUCAAAAUAAAAAUAAGCUAUUUUAAUCAAUUUUUAUUGAAUGCUAUUUUGUGAUAAAAAAAUAUUUAUUUUCUAUUUUAUAAAAUUUUAAAUCUUAAACCCAAAUCUCCACCCCUUAACUCUAAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009127586.2	ncRNA:24   CCAAAUCUCAAUUCCCCACCUCUA   1   |||**|||||*||||*|||||||| targets:816   GGUGAAGAGUGAAGGAGUGGAGAU   839 Target Full Sequence	2.5	PREDICTED: Brassica rapa uncharacterized LOC103850799 (LOC103850799), mRNA	uncharacterized LOC103850799(LOC103850799)	coding protein	psRNATarget