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BaseInfo

ncRNA ID novel_bra_miR877
Species Brassica rapa
Class miRNA
Genome position ChrA10:5612696-5612879 [-]
Reference genome Brapa_1.0
Source SRR1485269
Length 24
Mature sequence(if miRNA) 1 - UACGUAGCGACCGAGCUUUGGCCC - 24
Stem-loop(if miRNA) --   C                              U    C                              U    C             A
  GCU GAGCUCGGUCGCUACGUAGCGACCGAGCUU GGCU GAGCUCGGUCGCUACGUAGCGACCGAGCUU GGCU GAGCUCGGUCGCU C
  ||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||||||||||
  CGG UUCGAGCCAGCGAUGCAUCGCUGGCUCGAG UCGG UUCGAGCCAGCGAUGCAUCGCUGGCUCGAG UCGG UUCGAGCCAGCGA G
CC   U                              C    U                              C    U             U
Stem-loop sequence GCUCGAGCUCGGUCGCUACGUAGCGACCGAGCUUUGGCUCGAGCUCGGUCGCUACGUAGCGACCGAGCUUUGGCUCGAGCUCGGUCGCUACGUAGCGACCGAGCUUUGGCUCGAGCUCGGUCGCUACGUAGCGACCGAGCUUUGGCUCGAGCUCGGUCGCUACGUAGCGACCGAGCUUUGGCCC