ncRNA ID | novel_bra_miR872 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:17529753-17529878 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485268 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUACUUAUUGUCGGUUGACUU - 21 |
Stem-loop(if miRNA) |
--         UG     A   --A              GA     U AAGU    AAAUA    U   GUCAACUGA  GUGAG AAG   GGUUCAUGAUUCUU  UAUGG G    GUCU     GGUC U   |||||||||  ||||| |||   ||||||||||||||  ||||| |    ||||     ||||   CAGUUGGCU  UAUUC UUC   CCGAGUAUUGAGGG  AUGUC C    UAGA     UCAG U UU         GU     A   CAA              AA     U -AAU    ---AG    G |
Stem-loop sequence | GUCAACUGAUGGUGAGAAAGAGGUUCAUGAUUCUUGAUAUGGUGAAGUGUCUAAAUAGGUCUUUGGACUGAAGAUUAACUCUGUAAAGGGAGUUAUGAGCCAACCUUACUUAUUGUCGGUUGACUU |