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BaseInfo

ncRNA ID	novel_bra_miR871
Species	Brassica rapa
Class	miRNA
Genome position	ChrA2:14452662-14452757 [+]
Reference genome	Brapa_1.0
Source	SRR1485268
Length	21
Mature sequence(if miRNA)	76 - UCCAAUGAUAAUUUCUGACAU - 96
Stem-loop(if miRNA)	--                                        UUC  C   GUCAGAAAUUAUCAUUGGAGAUAUGCCAAAAACCGUCAUU   GA A   ||||||||||||||||||||||||||||||||||||||||   ||   CAGUCUUUAAUAGUAACCUCUAUACGGUUUUUGGCAGUAA   CU U UA                                        CCU  A
Stem-loop sequence	GUCAGAAAUUAUCAUUGGAGAUAUGCCAAAAACCGUCAUUUUCGACAUAUCUCCAAUGACGGUUUUUGGCAUAUCUCCAAUGAUAAUUUCUGACAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009114885.2	ncRNA:21   UACAGUCUUUAAUAGUAACCU   1   *|||=|||||||||||*|||| targets:2201   UUGUUAGAAAUUAUCAGUGGA   2221 Target Full Sequence	2.5	PREDICTED: Brassica rapa G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390 (LOC103838445), mRNA	G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390(LOC103838445)	coding protein	psRNATarget
XM_009127678.2	ncRNA:21   UACAGUCUUUAAUAGUAACCU   1   *||*||||||*|||||||||| targets:1394   CUGCCAGAAACUAUCAUUGGA   1414 Target Full Sequence	2.5	PREDICTED: Brassica rapa putative BTB/POZ domain-containing protein At5g13600 (LOC103850882), mRNA	putative BTB/POZ domain-containing protein At5g13600(LOC103850882)	coding protein	psRNATarget