| ncRNA ID | novel_bra_miR869 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA1:12686498-12686699 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1485268;SRR1485269 |
| Length | 21 |
| Mature sequence(if miRNA) | 182 - UUAUGGAGUCAGAGAGGACUC - 202 |
| Stem-loop(if miRNA) |
-- A C U A CA CA C A U GUUCUCUCU ACUCCAUAAUUAGGUUGUUGGUGAG CUCGAACCCA G CCUCACCCUUUAACAGCAUUCC CAGGA AG UGUCACCAAUUGA C G ||||||||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| || ||||||||||||| | CAGGAGAGA UGAGGUAUUAAUCCAACAACCACUC GAGCUUGGGU C GGAGUGGGAAAUUGUUGUGAGG GUCCU UC ACAGUGGUUAACU G C CU C U C A AG AC A A A |
| Stem-loop sequence | GUUCUCUCUAACUCCAUAAUUAGGUUGUUGGUGAGCCUCGAACCCAUGACCUCACCCUUUAACAGCAUUCCCACAGGACAAGCUGUCACCAAUUGAACUGCAGAUCAAUUGGUGACAACUCAUCCUGGAGGAGUGUUGUUAAAGGGUGAGGACCUGGGUUCGAGUCUCACCAACAACCUAAUUAUGGAGUCAGAGAGGACUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009147717.1 |
|
2.5 | PREDICTED: Brassica rapa probable serine/threonine protein kinase IREH1 (LOC103869639), mRNA | probable serine/threonine protein kinase IREH1(LOC103869639) | coding protein | psRNATarget |