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BaseInfo

ncRNA ID	novel_bra_miR866
Species	Brassica rapa
Class	miRNA
Genome position	ChrA4:6842327-6842564 [-]
Reference genome	Brapa_1.0
Source	SRR1485267
Length	21
Mature sequence(if miRNA)	218 - UUUAGAGAAUUAAAGAACAAA - 238
Stem-loop(if miRNA)	---UU                         G              G      C       A            AC      U   A           -----------------  GA   -  U         UAGAGAAUUAAAGAACAAAAUUAUU CUUGUUAAAUUUGA AAGGAA AAUCAUU UUUUUCAUUCCU  UAUUUU UUC UGUACAUUCUU                 UG  UCU GA UGGU      ||||||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||  |||||| ||| |||||||||||                 ||  ||| || |||G      AUCUCUUAAUUUCUUGUUUUAAUAA GAACAAUUUAAACU UUCCUU UUGGUAA GAAAAGUAAGGA  AUAAAA AAG GCAUGUAAGAA                 AC  AGA CU ACCA AAAAC                         G              A      C       G            CU      C   A           AAAAAUAAGCAAAUAGA  AA   G  U
Stem-loop sequence	UUUAGAGAAUUAAAGAACAAAAUUAUUGCUUGUUAAAUUUGAGAAGGAACAAUCAUUAUUUUUCAUUCCUACUAUUUUUUUCAUGUACAUUCUUUGGAUCUGAUUGGUGACCAUUCGAGAAACAAGAUAAACGAAUAAAAAAAGAAUGUACGAGAACAAAAUAUCAGGAAUGAAAAGGAAUGGUUCUUCCUUAUCAAAUUUAACAAGGAAUAAUUUUGUUCUUUAAUUCUCUACAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009118364.2	ncRNA:21   AAACAAGAAAUUAAGAGAUUU   1   |*||||||*|||||||||||* targets:2   UCUGUUCUCUAAUUCUCUAAC   22 Target Full Sequence	2.5	PREDICTED: Brassica rapa probable fructokinase-4 (LOC103841792), mRNA	probable fructokinase-4(LOC103841792)	coding protein	psRNATarget